Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Gm8152-201ENSMUST00000120842 637 ntBASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Gm33707-201ENSMUST00000195135 569 ntBASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Gm43547-201ENSMUST00000197729 328 ntBASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Gm43671-201ENSMUST00000200422 433 ntBASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps13aQ5H8C4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm3150-201ENSMUST00000166418 204 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm13094-201ENSMUST00000117930 409 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm6606-201ENSMUST00000193613 947 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm9644-201ENSMUST00000212828 1183 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm23769-201ENSMUST00000104441 121 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm7504-201ENSMUST00000201449 424 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm18010-201ENSMUST00000203553 202 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm9791-201ENSMUST00000060997 447 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm17541-201ENSMUST00000080062 525 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm10580-201ENSMUST00000097985 396 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm10581-201ENSMUST00000097986 231 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm10582-201ENSMUST00000097987 396 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Gm10583-201ENSMUST00000097988 396 ntBASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps13aQ5H8C4 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms