Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Gm12314-201ENSMUST00000118104 538 ntBASIC12.05□□□□□ -0.48
Scn2bQ56A07 Gm6023-201ENSMUST00000118217 606 ntBASIC12.05□□□□□ -0.48
Scn2bQ56A07 Gm13736-201ENSMUST00000119272 253 ntBASIC12.05□□□□□ -0.48
Scn2bQ56A07 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.05□□□□□ -0.48
Scn2bQ56A07 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.05□□□□□ -0.48
Scn2bQ56A07 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Gm22058-201ENSMUST00000083393 310 ntBASIC12.05□□□□□ -0.48
Scn2bQ56A07 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Scn2bQ56A07 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.04□□□□□ -0.48
Scn2bQ56A07 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.04□□□□□ -0.48
Scn2bQ56A07 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Scn2bQ56A07 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.04□□□□□ -0.48
Scn2bQ56A07 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Gm22018-201ENSMUST00000104357 131 ntBASIC12.04□□□□□ -0.48
Scn2bQ56A07 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Gm8738-201ENSMUST00000172606 329 ntBASIC12.04□□□□□ -0.48
Scn2bQ56A07 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.04□□□□□ -0.48
Scn2bQ56A07 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.04□□□□□ -0.48
Scn2bQ56A07 Gm5781-201ENSMUST00000219792 443 ntBASIC12.04□□□□□ -0.48
Scn2bQ56A07 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.04□□□□□ -0.48
Scn2bQ56A07 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn2bQ56A07 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.03□□□□□ -0.48
Scn2bQ56A07 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms