Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa3Q3UPR0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Gm24644-201ENSMUST00000157114 139 ntBASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Gm16296-201ENSMUST00000159905 325 ntBASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Gm25857-201ENSMUST00000082788 129 ntBASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Shisa3Q3UPR0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Gm12203-201ENSMUST00000118235 598 ntBASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Gm12384-201ENSMUST00000119228 919 ntBASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Gm11425-201ENSMUST00000119608 498 ntBASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Gm12209-201ENSMUST00000120089 596 ntBASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Gm14776-201ENSMUST00000121029 887 ntBASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.57□□□□□ -0.72
Shisa3Q3UPR0 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms