Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nhlrc4Q3UP44 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Gm13665-201ENSMUST00000120830 528 ntBASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Gm9136-201ENSMUST00000193368 454 ntBASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Gm18893-201ENSMUST00000198416 943 ntBASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nhlrc4Q3UP44 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Gm13296-201ENSMUST00000117854 997 ntBASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Gm44262-201ENSMUST00000204969 372 ntBASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Gm4607-201ENSMUST00000206649 577 ntBASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Gm5455-201ENSMUST00000058710 715 ntBASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nhlrc4Q3UP44 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms