Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.36□□□□□ -0.11
Limch1Q3UH68 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limch1Q3UH68 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limch1Q3UH68 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.36□□□□□ -0.11
Limch1Q3UH68 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limch1Q3UH68 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limch1Q3UH68 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Limch1Q3UH68 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Limch1Q3UH68 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Limch1Q3UH68 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Limch1Q3UH68 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limch1Q3UH68 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limch1Q3UH68 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limch1Q3UH68 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.35□□□□□ -0.11
Limch1Q3UH68 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.35□□□□□ -0.11
Limch1Q3UH68 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Gm4909-201ENSMUST00000118749 794 ntBASIC14.35□□□□□ -0.11
Limch1Q3UH68 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limch1Q3UH68 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Cog3-203ENSMUST00000227473 4197 ntBASIC14.34□□□□□ -0.11
Limch1Q3UH68 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.34□□□□□ -0.11
Limch1Q3UH68 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Map1b-203ENSMUST00000223725 2669 ntBASIC14.34□□□□□ -0.11
Limch1Q3UH68 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.34□□□□□ -0.11
Limch1Q3UH68 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Gm13570-201ENSMUST00000140763 309 ntBASIC14.34□□□□□ -0.11
Limch1Q3UH68 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.34□□□□□ -0.11
Limch1Q3UH68 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.34□□□□□ -0.11
Limch1Q3UH68 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Limch1Q3UH68 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms