Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm22331-201ENSMUST00000158066 136 ntBASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Gm6007-201ENSMUST00000208170 823 ntBASIC12.94□□□□□ -0.34
Trim43aQ3TL54 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Gm27731-201ENSMUST00000185192 107 ntBASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43aQ3TL54 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Gm14660-201ENSMUST00000119809 575 ntBASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Mir1938-201ENSMUST00000158746 100 ntBASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Gm8018-201ENSMUST00000173536 789 ntBASIC12.92□□□□□ -0.34
Trim43aQ3TL54 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43aQ3TL54 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms