Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm15004-201ENSMUST00000119192 630 ntBASIC13.18□□□□□ -0.3
Col9a2Q07643 Gm15595-201ENSMUST00000120840 961 ntBASIC13.18□□□□□ -0.3
Col9a2Q07643 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Col9a2Q07643 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.18□□□□□ -0.3
Col9a2Q07643 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.18□□□□□ -0.3
Col9a2Q07643 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.18□□□□□ -0.3
Col9a2Q07643 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Gm43378-201ENSMUST00000199336 582 ntBASIC13.18□□□□□ -0.3
Col9a2Q07643 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Gm44126-201ENSMUST00000204831 514 ntBASIC13.18□□□□□ -0.3
Col9a2Q07643 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Col9a2Q07643 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.18□□□□□ -0.3
Col9a2Q07643 Gm1821-202ENSMUST00000227415 750 ntBASIC13.18□□□□□ -0.3
Col9a2Q07643 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col9a2Q07643 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Col9a2Q07643 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Col9a2Q07643 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col9a2Q07643 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Col9a2Q07643 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col9a2Q07643 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.17□□□□□ -0.3
Col9a2Q07643 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.17□□□□□ -0.3
Col9a2Q07643 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.17□□□□□ -0.3
Col9a2Q07643 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Gm23912-201ENSMUST00000104687 87 ntBASIC13.17□□□□□ -0.3
Col9a2Q07643 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col9a2Q07643 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Gm44124-201ENSMUST00000204159 472 ntBASIC13.17□□□□□ -0.3
Col9a2Q07643 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Gm4157-201ENSMUST00000211647 679 ntBASIC13.17□□□□□ -0.3
Col9a2Q07643 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.17□□□□□ -0.3
Col9a2Q07643 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.17□□□□□ -0.3
Col9a2Q07643 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.17□□□□□ -0.3
Col9a2Q07643 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.17□□□□□ -0.3
Col9a2Q07643 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Col9a2Q07643 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.17□□□□□ -0.3
Col9a2Q07643 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.17□□□□□ -0.3
Col9a2Q07643 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col9a2Q07643 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.17□□□□□ -0.3
Col9a2Q07643 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Col9a2Q07643 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col9a2Q07643 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms