Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm37241-201ENSMUST00000191736 523 ntBASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm36974-201ENSMUST00000194200 1071 ntBASIC12.26□□□□□ -0.45
Col9a1Q05722 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Col9a1Q05722 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.26□□□□□ -0.45
Col9a1Q05722 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm8607-201ENSMUST00000221864 431 ntBASIC12.26□□□□□ -0.45
Col9a1Q05722 Vmn1r89-206ENSMUST00000227319 985 ntBASIC12.26□□□□□ -0.45
Col9a1Q05722 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.26□□□□□ -0.45
Col9a1Q05722 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm43771-201ENSMUST00000202931 1578 ntBASIC12.26□□□□□ -0.45
Col9a1Q05722 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Col9a1Q05722 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.25□□□□□ -0.45
Col9a1Q05722 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Gm12998-201ENSMUST00000122445 789 ntBASIC12.25□□□□□ -0.45
Col9a1Q05722 Gm15620-201ENSMUST00000122949 270 ntBASIC12.25□□□□□ -0.45
Col9a1Q05722 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col9a1Q05722 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Gm3489-201ENSMUST00000190083 528 ntBASIC12.25□□□□□ -0.45
Col9a1Q05722 Gm37197-201ENSMUST00000195607 401 ntBASIC12.25□□□□□ -0.45
Col9a1Q05722 Gm44559-201ENSMUST00000207177 1012 ntBASIC12.25□□□□□ -0.45
Col9a1Q05722 Gm7688-201ENSMUST00000212857 337 ntBASIC12.25□□□□□ -0.45
Col9a1Q05722 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.25□□□□□ -0.45
Col9a1Q05722 Gm19174-201ENSMUST00000216944 956 ntBASIC12.25□□□□□ -0.45
Col9a1Q05722 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Gap43-201ENSMUST00000102817 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 AC153959.1-201ENSMUST00000213617 1694 ntBASIC12.25□□□□□ -0.45
Col9a1Q05722 Gm4806-201ENSMUST00000222704 1690 ntBASIC12.25□□□□□ -0.45
Col9a1Q05722 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col9a1Q05722 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a1Q05722 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm24248-201ENSMUST00000157321 322 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm23400-201ENSMUST00000174994 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm26463-201ENSMUST00000175065 101 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm24332-201ENSMUST00000175102 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm25959-201ENSMUST00000175112 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm22475-201ENSMUST00000175169 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm22903-201ENSMUST00000175193 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm25070-201ENSMUST00000175237 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm24159-201ENSMUST00000175264 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm25299-201ENSMUST00000175283 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm23798-201ENSMUST00000175560 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm23802-201ENSMUST00000175565 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm25708-201ENSMUST00000177687 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm24370-201ENSMUST00000178007 102 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms