Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr5Q04683 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Gm43818-201ENSMUST00000200605 466 ntBASIC11.59□□□□□ -0.55
Cxcr5Q04683 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.59□□□□□ -0.55
Cxcr5Q04683 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Gm39404-201ENSMUST00000216350 313 ntBASIC11.59□□□□□ -0.55
Cxcr5Q04683 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr5Q04683 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.59□□□□□ -0.55
Cxcr5Q04683 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.59□□□□□ -0.55
Cxcr5Q04683 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcr5Q04683 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.59□□□□□ -0.55
Cxcr5Q04683 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.58□□□□□ -0.55
Cxcr5Q04683 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.58□□□□□ -0.55
Cxcr5Q04683 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cxcr5Q04683 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.58□□□□□ -0.56
Cxcr5Q04683 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.58□□□□□ -0.56
Cxcr5Q04683 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.58□□□□□ -0.56
Cxcr5Q04683 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.58□□□□□ -0.56
Cxcr5Q04683 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.58□□□□□ -0.56
Cxcr5Q04683 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cxcr5Q04683 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcr5Q04683 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.58□□□□□ -0.56
Cxcr5Q04683 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.57□□□□□ -0.56
Cxcr5Q04683 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Gm23912-201ENSMUST00000104687 87 ntBASIC11.57□□□□□ -0.56
Cxcr5Q04683 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.57□□□□□ -0.56
Cxcr5Q04683 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.57□□□□□ -0.56
Cxcr5Q04683 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcr5Q04683 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms