Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Gm14148-201ENSMUST00000122433 1008 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
PrkdcP97313 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
PrkdcP97313 Gm7445-201ENSMUST00000192115 340 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Gm36980-201ENSMUST00000195643 622 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Cacna2d3-208ENSMUST00000225985 918 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC8.01□□□□□ -1.13
PrkdcP97313 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
PrkdcP97313 Gm7405-201ENSMUST00000121476 1337 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC8.01□□□□□ -1.13
PrkdcP97313 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Gm6518-201ENSMUST00000208450 342 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Gm9796-201ENSMUST00000062249 2250 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC8.01□□□□□ -1.13
PrkdcP97313 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
PrkdcP97313 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
PrkdcP97313 Gm42732-201ENSMUST00000202887 1197 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Gm3635-201ENSMUST00000212314 354 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
PrkdcP97313 Gm7242-201ENSMUST00000221134 705 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
PrkdcP97313 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
PrkdcP97313 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
PrkdcP97313 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC8□□□□□ -1.13
PrkdcP97313 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Gm6441-201ENSMUST00000120983 696 ntBASIC8□□□□□ -1.13
PrkdcP97313 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC8□□□□□ -1.13
PrkdcP97313 Gm23432-201ENSMUST00000157181 131 ntBASIC8□□□□□ -1.13
PrkdcP97313 Gm16228-201ENSMUST00000162286 809 ntBASIC8□□□□□ -1.13
PrkdcP97313 Gm8643-201ENSMUST00000195228 625 ntBASIC8□□□□□ -1.13
PrkdcP97313 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC8□□□□□ -1.13
PrkdcP97313 AC158986.2-201ENSMUST00000227487 618 ntBASIC8□□□□□ -1.13
PrkdcP97313 AC122035.1-201ENSMUST00000227576 1016 ntBASIC8□□□□□ -1.13
PrkdcP97313 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
PrkdcP97313 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC8□□□□□ -1.13
PrkdcP97313 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC8□□□□□ -1.13
PrkdcP97313 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
PrkdcP97313 AC121567.1-201ENSMUST00000227213 842 ntBASIC8□□□□□ -1.13
PrkdcP97313 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
PrkdcP97313 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC8□□□□□ -1.13
PrkdcP97313 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
PrkdcP97313 Gm14176-201ENSMUST00000121302 477 ntBASIC8□□□□□ -1.13
PrkdcP97313 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC8□□□□□ -1.13
PrkdcP97313 Gm44942-201ENSMUST00000096093 2072 ntBASIC8□□□□□ -1.13
PrkdcP97313 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
PrkdcP97313 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms