Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Gm9257-201ENSMUST00000221254 232 ntBASIC10.92□□□□□ -0.66
SgcbP82349 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.92□□□□□ -0.66
SgcbP82349 AC125539.1-201ENSMUST00000227423 622 ntBASIC10.92□□□□□ -0.66
SgcbP82349 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Gm9996-201ENSMUST00000070359 913 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Gm22042-201ENSMUST00000082989 165 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Gm26232-201ENSMUST00000083360 166 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Gm26110-201ENSMUST00000083971 165 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SgcbP82349 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.92□□□□□ -0.66
SgcbP82349 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SgcbP82349 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.92□□□□□ -0.66
SgcbP82349 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SgcbP82349 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.91□□□□□ -0.66
SgcbP82349 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.91□□□□□ -0.66
SgcbP82349 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
SgcbP82349 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.91□□□□□ -0.66
SgcbP82349 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.91□□□□□ -0.66
SgcbP82349 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Gm23119-201ENSMUST00000158610 140 ntBASIC10.91□□□□□ -0.66
SgcbP82349 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
SgcbP82349 Gm5070-201ENSMUST00000177599 862 ntBASIC10.91□□□□□ -0.66
SgcbP82349 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.91□□□□□ -0.66
SgcbP82349 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.91□□□□□ -0.66
SgcbP82349 Gm5244-202ENSMUST00000189517 743 ntBASIC10.91□□□□□ -0.66
SgcbP82349 Gm38317-201ENSMUST00000195564 343 ntBASIC10.91□□□□□ -0.66
SgcbP82349 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.91□□□□□ -0.66
SgcbP82349 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.91□□□□□ -0.66
SgcbP82349 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.91□□□□□ -0.66
SgcbP82349 AC102523.2-201ENSMUST00000227813 983 ntBASIC10.91□□□□□ -0.66
SgcbP82349 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.91□□□□□ -0.66
SgcbP82349 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
SgcbP82349 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SgcbP82349 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
SgcbP82349 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.91□□□□□ -0.66
SgcbP82349 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.91□□□□□ -0.66
SgcbP82349 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcbP82349 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.9□□□□□ -0.66
SgcbP82349 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SgcbP82349 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
SgcbP82349 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms