Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Gm30285-201ENSMUST00000214614 422 ntBASIC10.19□□□□□ -0.78
Pdlim4P70271 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Cts7-204ENSMUST00000225321 1257 ntBASIC10.19□□□□□ -0.78
Pdlim4P70271 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.19□□□□□ -0.78
Pdlim4P70271 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.18□□□□□ -0.78
Pdlim4P70271 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Pdlim4P70271 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.18□□□□□ -0.78
Pdlim4P70271 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Gm14723-201ENSMUST00000118686 215 ntBASIC10.18□□□□□ -0.78
Pdlim4P70271 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.18□□□□□ -0.78
Pdlim4P70271 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.18□□□□□ -0.78
Pdlim4P70271 Gm13570-201ENSMUST00000140763 309 ntBASIC10.18□□□□□ -0.78
Pdlim4P70271 Gm25043-201ENSMUST00000158604 212 ntBASIC10.18□□□□□ -0.78
Pdlim4P70271 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.18□□□□□ -0.78
Pdlim4P70271 Gm27243-201ENSMUST00000183964 521 ntBASIC10.18□□□□□ -0.78
Pdlim4P70271 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Pdlim4P70271 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pdlim4P70271 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.18□□□□□ -0.78
Pdlim4P70271 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.18□□□□□ -0.78
Pdlim4P70271 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.18□□□□□ -0.78
Pdlim4P70271 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Pdlim4P70271 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pdlim4P70271 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pdlim4P70271 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pdlim4P70271 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Pdlim4P70271 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pdlim4P70271 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pdlim4P70271 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Gm11531-201ENSMUST00000117614 555 ntBASIC10.17□□□□□ -0.78
Pdlim4P70271 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.17□□□□□ -0.78
Pdlim4P70271 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pdlim4P70271 Mir8109-201ENSMUST00000184375 117 ntBASIC10.17□□□□□ -0.78
Pdlim4P70271 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.17□□□□□ -0.78
Pdlim4P70271 Gm45865-201ENSMUST00000211815 945 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms