Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crnkl1P63154 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.08□□□□□ -0.48
Crnkl1P63154 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crnkl1P63154 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crnkl1P63154 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crnkl1P63154 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Crnkl1P63154 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Crnkl1P63154 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.07□□□□□ -0.48
Crnkl1P63154 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Crnkl1P63154 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.07□□□□□ -0.48
Crnkl1P63154 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Crnkl1P63154 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Gm8463-201ENSMUST00000208573 613 ntBASIC12.07□□□□□ -0.48
Crnkl1P63154 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Itm2b-204ENSMUST00000228637 783 ntBASIC12.07□□□□□ -0.48
Crnkl1P63154 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.07□□□□□ -0.48
Crnkl1P63154 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Crnkl1P63154 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Crnkl1P63154 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Crnkl1P63154 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.06□□□□□ -0.48
Crnkl1P63154 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.06□□□□□ -0.48
Crnkl1P63154 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Crnkl1P63154 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Crnkl1P63154 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Crnkl1P63154 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.06□□□□□ -0.48
Crnkl1P63154 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.06□□□□□ -0.48
Crnkl1P63154 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.06□□□□□ -0.48
Crnkl1P63154 Gm18187-201ENSMUST00000196476 984 ntBASIC12.06□□□□□ -0.48
Crnkl1P63154 Gm7287-201ENSMUST00000205267 602 ntBASIC12.06□□□□□ -0.48
Crnkl1P63154 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.06□□□□□ -0.48
Crnkl1P63154 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.06□□□□□ -0.48
Crnkl1P63154 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Crnkl1P63154 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Crnkl1P63154 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.06□□□□□ -0.48
Crnkl1P63154 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Crnkl1P63154 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Crnkl1P63154 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Crnkl1P63154 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.05□□□□□ -0.48
Crnkl1P63154 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.05□□□□□ -0.48
Crnkl1P63154 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.05□□□□□ -0.48
Crnkl1P63154 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Crnkl1P63154 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.05□□□□□ -0.48
Crnkl1P63154 Gm8602-201ENSMUST00000184045 607 ntBASIC12.05□□□□□ -0.48
Crnkl1P63154 Gm27486-201ENSMUST00000184923 80 ntBASIC12.05□□□□□ -0.48
Crnkl1P63154 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.05□□□□□ -0.48
Crnkl1P63154 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Crnkl1P63154 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.05□□□□□ -0.48
Crnkl1P63154 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.05□□□□□ -0.48
Crnkl1P63154 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.05□□□□□ -0.48
Crnkl1P63154 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.05□□□□□ -0.48
Crnkl1P63154 Gm18473-201ENSMUST00000220543 868 ntBASIC12.05□□□□□ -0.48
Crnkl1P63154 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms