Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.5□□□□□ -0.41
Ybx1P62960 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.5□□□□□ -0.41
Ybx1P62960 Gm43184-201ENSMUST00000197247 542 ntBASIC12.5□□□□□ -0.41
Ybx1P62960 Mir7686-201ENSMUST00000200604 57 ntBASIC12.5□□□□□ -0.41
Ybx1P62960 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.5□□□□□ -0.41
Ybx1P62960 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Gm10752-201ENSMUST00000218348 729 ntBASIC12.5□□□□□ -0.41
Ybx1P62960 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.5□□□□□ -0.41
Ybx1P62960 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.5□□□□□ -0.41
Ybx1P62960 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ybx1P62960 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ybx1P62960 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.5□□□□□ -0.41
Ybx1P62960 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.5□□□□□ -0.41
Ybx1P62960 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.5□□□□□ -0.41
Ybx1P62960 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ybx1P62960 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ybx1P62960 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Ybx1P62960 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ybx1P62960 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.49□□□□□ -0.41
Ybx1P62960 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.49□□□□□ -0.41
Ybx1P62960 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ybx1P62960 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.49□□□□□ -0.41
Ybx1P62960 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ybx1P62960 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.49□□□□□ -0.41
Ybx1P62960 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.49□□□□□ -0.41
Ybx1P62960 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.49□□□□□ -0.41
Ybx1P62960 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.49□□□□□ -0.41
Ybx1P62960 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ybx1P62960 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ybx1P62960 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ybx1P62960 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Ybx1P62960 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.48□□□□□ -0.41
Ybx1P62960 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ybx1P62960 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.48□□□□□ -0.41
Ybx1P62960 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.48□□□□□ -0.41
Ybx1P62960 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.48□□□□□ -0.41
Ybx1P62960 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Gm12857-201ENSMUST00000117678 592 ntBASIC12.48□□□□□ -0.41
Ybx1P62960 Gm15573-201ENSMUST00000119487 540 ntBASIC12.48□□□□□ -0.41
Ybx1P62960 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.48□□□□□ -0.41
Ybx1P62960 Gm8100-201ENSMUST00000182906 988 ntBASIC12.48□□□□□ -0.41
Ybx1P62960 Gm8365-201ENSMUST00000197334 648 ntBASIC12.48□□□□□ -0.41
Ybx1P62960 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.48□□□□□ -0.41
Ybx1P62960 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.48□□□□□ -0.41
Ybx1P62960 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ybx1P62960 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ybx1P62960 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ybx1P62960 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms