Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Sf3b6P59708 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm11597-201ENSMUST00000121423 964 ntBASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm2231-201ENSMUST00000125661 612 ntBASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.83□□□□□ -0.68
Sf3b6P59708 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm27847-201ENSMUST00000183711 107 ntBASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm27375-201ENSMUST00000183799 107 ntBASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm37922-201ENSMUST00000195596 455 ntBASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.83□□□□□ -0.68
Sf3b6P59708 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.83□□□□□ -0.68
Sf3b6P59708 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Sf3b6P59708 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.83□□□□□ -0.68
Sf3b6P59708 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Sf3b6P59708 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.83□□□□□ -0.68
Sf3b6P59708 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.83□□□□□ -0.68
Sf3b6P59708 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sf3b6P59708 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.82□□□□□ -0.68
Sf3b6P59708 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.82□□□□□ -0.68
Sf3b6P59708 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.82□□□□□ -0.68
Sf3b6P59708 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.82□□□□□ -0.68
Sf3b6P59708 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Sf3b6P59708 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sf3b6P59708 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Gm9083-201ENSMUST00000120423 819 ntBASIC10.82□□□□□ -0.68
Sf3b6P59708 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.82□□□□□ -0.68
Sf3b6P59708 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Sf3b6P59708 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.82□□□□□ -0.68
Sf3b6P59708 Gm18304-201ENSMUST00000189162 546 ntBASIC10.82□□□□□ -0.68
Sf3b6P59708 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.82□□□□□ -0.68
Sf3b6P59708 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.82□□□□□ -0.68
Sf3b6P59708 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.82□□□□□ -0.68
Sf3b6P59708 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sf3b6P59708 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.82□□□□□ -0.68
Sf3b6P59708 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sf3b6P59708 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Sf3b6P59708 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC10.82□□□□□ -0.68
Sf3b6P59708 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sf3b6P59708 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.81□□□□□ -0.68
Sf3b6P59708 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sf3b6P59708 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sf3b6P59708 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Sf3b6P59708 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms