Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
Cdh11P55288 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Cdh11P55288 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.13□□□□□ -0.63
Cdh11P55288 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Cdh11P55288 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Cdh11P55288 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.13□□□□□ -0.63
Cdh11P55288 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.13□□□□□ -0.63
Cdh11P55288 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.13□□□□□ -0.63
Cdh11P55288 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.13□□□□□ -0.63
Cdh11P55288 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cdh11P55288 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.13□□□□□ -0.63
Cdh11P55288 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.13□□□□□ -0.63
Cdh11P55288 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.13□□□□□ -0.63
Cdh11P55288 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.13□□□□□ -0.63
Cdh11P55288 Gm37042-201ENSMUST00000193816 581 ntBASIC11.13□□□□□ -0.63
Cdh11P55288 Gm9368-201ENSMUST00000219348 831 ntBASIC11.13□□□□□ -0.63
Cdh11P55288 Gm45930-201ENSMUST00000221330 292 ntBASIC11.13□□□□□ -0.63
Cdh11P55288 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.13□□□□□ -0.63
Cdh11P55288 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
Cdh11P55288 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.13□□□□□ -0.63
Cdh11P55288 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cdh11P55288 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cdh11P55288 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cdh11P55288 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cdh11P55288 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh11P55288 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.13□□□□□ -0.63
Cdh11P55288 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cdh11P55288 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Cdh11P55288 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdh11P55288 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cdh11P55288 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Gm12241-201ENSMUST00000118330 726 ntBASIC11.12□□□□□ -0.63
Cdh11P55288 Gm11591-201ENSMUST00000120063 702 ntBASIC11.12□□□□□ -0.63
Cdh11P55288 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.12□□□□□ -0.63
Cdh11P55288 Gm14760-201ENSMUST00000121831 999 ntBASIC11.12□□□□□ -0.63
Cdh11P55288 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdh11P55288 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdh11P55288 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Gm7809-201ENSMUST00000153199 742 ntBASIC11.12□□□□□ -0.63
Cdh11P55288 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.12□□□□□ -0.63
Cdh11P55288 Gm17208-201ENSMUST00000168388 535 ntBASIC11.12□□□□□ -0.63
Cdh11P55288 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Mir8109-201ENSMUST00000184375 117 ntBASIC11.12□□□□□ -0.63
Cdh11P55288 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdh11P55288 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdh11P55288 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Cdh11P55288 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdh11P55288 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms