Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm37744-201ENSMUST00000194616 1590 ntBASIC13.17□□□□□ -0.3
Nub1P54729 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Gm22323-201ENSMUST00000103832 109 ntBASIC13.17□□□□□ -0.3
Nub1P54729 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Nub1P54729 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.17□□□□□ -0.3
Nub1P54729 Gm31256-201ENSMUST00000194705 506 ntBASIC13.17□□□□□ -0.3
Nub1P54729 Gm44364-201ENSMUST00000198368 141 ntBASIC13.17□□□□□ -0.3
Nub1P54729 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.17□□□□□ -0.3
Nub1P54729 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.17□□□□□ -0.3
Nub1P54729 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.17□□□□□ -0.3
Nub1P54729 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.17□□□□□ -0.3
Nub1P54729 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.17□□□□□ -0.3
Nub1P54729 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.17□□□□□ -0.3
Nub1P54729 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nub1P54729 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Nub1P54729 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Nub1P54729 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.17□□□□□ -0.3
Nub1P54729 AC124433.1-202ENSMUST00000224762 1535 ntBASIC13.17□□□□□ -0.3
Nub1P54729 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.17□□□□□ -0.3
Nub1P54729 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.17□□□□□ -0.3
Nub1P54729 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nub1P54729 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nub1P54729 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nub1P54729 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.16□□□□□ -0.3
Nub1P54729 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nub1P54729 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Nub1P54729 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.16□□□□□ -0.3
Nub1P54729 Gm7584-201ENSMUST00000175829 940 ntBASIC13.16□□□□□ -0.3
Nub1P54729 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Gm37259-201ENSMUST00000193903 849 ntBASIC13.16□□□□□ -0.3
Nub1P54729 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.16□□□□□ -0.3
Nub1P54729 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.16□□□□□ -0.3
Nub1P54729 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 AC132260.2-201ENSMUST00000224482 344 ntBASIC13.16□□□□□ -0.3
Nub1P54729 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.16□□□□□ -0.3
Nub1P54729 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nub1P54729 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nub1P54729 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.16□□□□□ -0.3
Nub1P54729 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nub1P54729 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nub1P54729 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nub1P54729 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Nub1P54729 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nub1P54729 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nub1P54729 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.15□□□□□ -0.3
Nub1P54729 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Nub1P54729 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nub1P54729 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Nub1P54729 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nub1P54729 Gm24934-201ENSMUST00000103764 111 ntBASIC13.15□□□□□ -0.3
Nub1P54729 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nub1P54729 Gm15547-201ENSMUST00000122152 333 ntBASIC13.15□□□□□ -0.3
Nub1P54729 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nub1P54729 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nub1P54729 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nub1P54729 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.15□□□□□ -0.3
Nub1P54729 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.15□□□□□ -0.3
Nub1P54729 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.15□□□□□ -0.3
Nub1P54729 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nub1P54729 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nub1P54729 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nub1P54729 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.15□□□□□ -0.3
Nub1P54729 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.15□□□□□ -0.3
Nub1P54729 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Nub1P54729 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms