Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RoraP51448 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
RoraP51448 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
RoraP51448 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RoraP51448 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.59□□□□□ -0.55
RoraP51448 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RoraP51448 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RoraP51448 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
RoraP51448 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
RoraP51448 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
RoraP51448 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.58□□□□□ -0.56
RoraP51448 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.58□□□□□ -0.56
RoraP51448 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
RoraP51448 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.58□□□□□ -0.56
RoraP51448 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
RoraP51448 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
RoraP51448 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.58□□□□□ -0.56
RoraP51448 B9d1os-201ENSMUST00000137010 674 ntBASIC11.58□□□□□ -0.56
RoraP51448 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.58□□□□□ -0.56
RoraP51448 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.58□□□□□ -0.56
RoraP51448 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.58□□□□□ -0.56
RoraP51448 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
RoraP51448 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.58□□□□□ -0.56
RoraP51448 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
RoraP51448 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
RoraP51448 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
RoraP51448 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
RoraP51448 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.58□□□□□ -0.56
RoraP51448 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.58□□□□□ -0.56
RoraP51448 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RoraP51448 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
RoraP51448 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.57□□□□□ -0.56
RoraP51448 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
RoraP51448 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.57□□□□□ -0.56
RoraP51448 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Gm24934-201ENSMUST00000103764 111 ntBASIC11.57□□□□□ -0.56
RoraP51448 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.57□□□□□ -0.56
RoraP51448 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.57□□□□□ -0.56
RoraP51448 Gm9083-201ENSMUST00000120423 819 ntBASIC11.57□□□□□ -0.56
RoraP51448 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
RoraP51448 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.57□□□□□ -0.56
RoraP51448 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Mir6979-201ENSMUST00000183927 56 ntBASIC11.57□□□□□ -0.56
RoraP51448 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.57□□□□□ -0.56
RoraP51448 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
RoraP51448 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.57□□□□□ -0.56
RoraP51448 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.57□□□□□ -0.56
RoraP51448 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.57□□□□□ -0.56
RoraP51448 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.57□□□□□ -0.56
RoraP51448 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
RoraP51448 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RoraP51448 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms