Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
GdnfP48540 Gm16177-201ENSMUST00000120728 718 ntBASIC10.73□□□□□ -0.69
GdnfP48540 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.73□□□□□ -0.69
GdnfP48540 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Gm45696-201ENSMUST00000212088 985 ntBASIC10.73□□□□□ -0.69
GdnfP48540 AC132446.1-201ENSMUST00000222655 226 ntBASIC10.73□□□□□ -0.69
GdnfP48540 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
GdnfP48540 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
GdnfP48540 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
GdnfP48540 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.73□□□□□ -0.69
GdnfP48540 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
GdnfP48540 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.73□□□□□ -0.69
GdnfP48540 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.73□□□□□ -0.69
GdnfP48540 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
GdnfP48540 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
GdnfP48540 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.73□□□□□ -0.69
GdnfP48540 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.73□□□□□ -0.69
GdnfP48540 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
GdnfP48540 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
GdnfP48540 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
GdnfP48540 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.72□□□□□ -0.69
GdnfP48540 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.72□□□□□ -0.69
GdnfP48540 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
GdnfP48540 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.72□□□□□ -0.69
GdnfP48540 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
GdnfP48540 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.72□□□□□ -0.69
GdnfP48540 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
GdnfP48540 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
GdnfP48540 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.72□□□□□ -0.69
GdnfP48540 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.72□□□□□ -0.69
GdnfP48540 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC10.72□□□□□ -0.69
GdnfP48540 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.72□□□□□ -0.69
GdnfP48540 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.72□□□□□ -0.69
GdnfP48540 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.72□□□□□ -0.69
GdnfP48540 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC10.72□□□□□ -0.69
GdnfP48540 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.72□□□□□ -0.69
GdnfP48540 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.72□□□□□ -0.69
GdnfP48540 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
GdnfP48540 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
GdnfP48540 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms