Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox18P43680 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox18P43680 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox18P43680 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Gm12507-201ENSMUST00000119155 415 ntBASIC11.88□□□□□ -0.51
Sox18P43680 Gm12196-201ENSMUST00000120954 262 ntBASIC11.88□□□□□ -0.51
Sox18P43680 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox18P43680 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox18P43680 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Gm25881-201ENSMUST00000157783 103 ntBASIC11.88□□□□□ -0.51
Sox18P43680 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox18P43680 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox18P43680 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Sox18P43680 Gm6905-201ENSMUST00000205729 511 ntBASIC11.88□□□□□ -0.51
Sox18P43680 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox18P43680 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC11.88□□□□□ -0.51
Sox18P43680 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.88□□□□□ -0.51
Sox18P43680 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sox18P43680 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Sox18P43680 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox18P43680 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sox18P43680 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.87□□□□□ -0.51
Sox18P43680 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.87□□□□□ -0.51
Sox18P43680 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sox18P43680 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Sox18P43680 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Sox18P43680 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.87□□□□□ -0.51
Sox18P43680 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sox18P43680 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.87□□□□□ -0.51
Sox18P43680 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sox18P43680 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sox18P43680 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.87□□□□□ -0.51
Sox18P43680 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Gm14921-201ENSMUST00000118643 908 ntBASIC11.87□□□□□ -0.51
Sox18P43680 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.87□□□□□ -0.51
Sox18P43680 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Sox18P43680 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.87□□□□□ -0.51
Sox18P43680 Mir6998-201ENSMUST00000183343 64 ntBASIC11.87□□□□□ -0.51
Sox18P43680 Gm36966-201ENSMUST00000192217 413 ntBASIC11.87□□□□□ -0.51
Sox18P43680 Gm38384-201ENSMUST00000195413 1122 ntBASIC11.87□□□□□ -0.51
Sox18P43680 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC11.87□□□□□ -0.51
Sox18P43680 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sox18P43680 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sox18P43680 Gm39404-201ENSMUST00000216350 313 ntBASIC11.87□□□□□ -0.51
Sox18P43680 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.87□□□□□ -0.51
Sox18P43680 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.87□□□□□ -0.51
Sox18P43680 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sox18P43680 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Gm42478-201ENSMUST00000199252 1467 ntBASIC11.87□□□□□ -0.51
Sox18P43680 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox18P43680 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms