Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.76□□□□□ -0.53
Tnfsf4P43488 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.76□□□□□ -0.53
Tnfsf4P43488 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Gm5781-201ENSMUST00000219792 443 ntBASIC11.76□□□□□ -0.53
Tnfsf4P43488 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.76□□□□□ -0.53
Tnfsf4P43488 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.76□□□□□ -0.53
Tnfsf4P43488 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.76□□□□□ -0.53
Tnfsf4P43488 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf4P43488 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.75□□□□□ -0.53
Tnfsf4P43488 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Gm12390-201ENSMUST00000117897 397 ntBASIC11.75□□□□□ -0.53
Tnfsf4P43488 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.75□□□□□ -0.53
Tnfsf4P43488 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.75□□□□□ -0.53
Tnfsf4P43488 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.75□□□□□ -0.53
Tnfsf4P43488 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Gm7653-201ENSMUST00000214567 508 ntBASIC11.75□□□□□ -0.53
Tnfsf4P43488 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.75□□□□□ -0.53
Tnfsf4P43488 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf4P43488 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.74□□□□□ -0.53
Tnfsf4P43488 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms