Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.8□□□□□ -0.36
Gdf6P43028 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gdf6P43028 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gdf6P43028 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gdf6P43028 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.79□□□□□ -0.36
Gdf6P43028 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.79□□□□□ -0.36
Gdf6P43028 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.79□□□□□ -0.36
Gdf6P43028 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Gdf6P43028 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Gdf6P43028 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gdf6P43028 Gm12165-201ENSMUST00000117047 342 ntBASIC12.79□□□□□ -0.36
Gdf6P43028 Gm13045-201ENSMUST00000119019 712 ntBASIC12.79□□□□□ -0.36
Gdf6P43028 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.79□□□□□ -0.36
Gdf6P43028 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.79□□□□□ -0.36
Gdf6P43028 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Gm4482-201ENSMUST00000200876 742 ntBASIC12.79□□□□□ -0.36
Gdf6P43028 Gm45118-201ENSMUST00000208928 825 ntBASIC12.79□□□□□ -0.36
Gdf6P43028 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.79□□□□□ -0.36
Gdf6P43028 Gm9797-202ENSMUST00000218003 294 ntBASIC12.79□□□□□ -0.36
Gdf6P43028 Gm1821-202ENSMUST00000227415 750 ntBASIC12.79□□□□□ -0.36
Gdf6P43028 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Gdf6P43028 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Gdf6P43028 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gdf6P43028 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.78□□□□□ -0.36
Gdf6P43028 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Gdf6P43028 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Gdf6P43028 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Gdf6P43028 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gdf6P43028 Gm11941-201ENSMUST00000119904 610 ntBASIC12.78□□□□□ -0.36
Gdf6P43028 Gm22334-201ENSMUST00000158070 133 ntBASIC12.78□□□□□ -0.36
Gdf6P43028 Mir1943-201ENSMUST00000158276 73 ntBASIC12.78□□□□□ -0.36
Gdf6P43028 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gdf6P43028 Mir3547-201ENSMUST00000175461 88 ntBASIC12.78□□□□□ -0.36
Gdf6P43028 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gdf6P43028 Gm5523-201ENSMUST00000180415 997 ntBASIC12.78□□□□□ -0.36
Gdf6P43028 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.78□□□□□ -0.36
Gdf6P43028 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.78□□□□□ -0.36
Gdf6P43028 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.78□□□□□ -0.36
Gdf6P43028 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.78□□□□□ -0.36
Gdf6P43028 Gm5705-201ENSMUST00000066241 711 ntBASIC12.78□□□□□ -0.36
Gdf6P43028 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gdf6P43028 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.78□□□□□ -0.36
Gdf6P43028 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gdf6P43028 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gdf6P43028 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gdf6P43028 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gdf6P43028 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gdf6P43028 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gdf6P43028 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.77□□□□□ -0.36
Gdf6P43028 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gdf6P43028 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gdf6P43028 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gdf6P43028 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gdf6P43028 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Gdf6P43028 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Gdf6P43028 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gdf6P43028 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gdf6P43028 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gdf6P43028 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gdf6P43028 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms