Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox6P40645 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sox6P40645 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Sox6P40645 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.47□□□□□ -0.57
Sox6P40645 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.47□□□□□ -0.57
Sox6P40645 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.47□□□□□ -0.57
Sox6P40645 AY702102-202ENSMUST00000194651 1173 ntBASIC11.47□□□□□ -0.57
Sox6P40645 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox6P40645 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.47□□□□□ -0.57
Sox6P40645 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.47□□□□□ -0.57
Sox6P40645 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.47□□□□□ -0.57
Sox6P40645 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox6P40645 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox6P40645 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox6P40645 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox6P40645 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox6P40645 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.46□□□□□ -0.57
Sox6P40645 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox6P40645 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sox6P40645 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox6P40645 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sox6P40645 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox6P40645 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Gm13813-201ENSMUST00000120998 787 ntBASIC11.46□□□□□ -0.57
Sox6P40645 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.46□□□□□ -0.57
Sox6P40645 Gm16379-201ENSMUST00000161469 348 ntBASIC11.46□□□□□ -0.57
Sox6P40645 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.46□□□□□ -0.57
Sox6P40645 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.46□□□□□ -0.57
Sox6P40645 Gm8762-201ENSMUST00000193486 339 ntBASIC11.46□□□□□ -0.57
Sox6P40645 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.46□□□□□ -0.57
Sox6P40645 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox6P40645 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.46□□□□□ -0.57
Sox6P40645 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.46□□□□□ -0.57
Sox6P40645 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.46□□□□□ -0.57
Sox6P40645 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.46□□□□□ -0.57
Sox6P40645 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox6P40645 Mir339-201ENSMUST00000083659 96 ntBASIC11.46□□□□□ -0.57
Sox6P40645 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Sox6P40645 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.46□□□□□ -0.58
Sox6P40645 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Sox6P40645 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Sox6P40645 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sox6P40645 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms