Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TfamP40630 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TfamP40630 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.81□□□□□ -0.52
TfamP40630 Gm24548-201ENSMUST00000158650 108 ntBASIC11.81□□□□□ -0.52
TfamP40630 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.81□□□□□ -0.52
TfamP40630 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
TfamP40630 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.81□□□□□ -0.52
TfamP40630 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TfamP40630 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.81□□□□□ -0.52
TfamP40630 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TfamP40630 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TfamP40630 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.8□□□□□ -0.52
TfamP40630 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.8□□□□□ -0.52
TfamP40630 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.8□□□□□ -0.52
TfamP40630 Gm14660-201ENSMUST00000119809 575 ntBASIC11.8□□□□□ -0.52
TfamP40630 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.8□□□□□ -0.52
TfamP40630 Gm45784-201ENSMUST00000188360 142 ntBASIC11.8□□□□□ -0.52
TfamP40630 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.8□□□□□ -0.52
TfamP40630 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.8□□□□□ -0.52
TfamP40630 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TfamP40630 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.8□□□□□ -0.52
TfamP40630 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.8□□□□□ -0.52
TfamP40630 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TfamP40630 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TfamP40630 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TfamP40630 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
TfamP40630 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.8□□□□□ -0.52
TfamP40630 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TfamP40630 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TfamP40630 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TfamP40630 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
TfamP40630 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.79□□□□□ -0.52
TfamP40630 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TfamP40630 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TfamP40630 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
TfamP40630 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TfamP40630 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TfamP40630 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TfamP40630 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TfamP40630 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TfamP40630 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.79□□□□□ -0.52
TfamP40630 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.79□□□□□ -0.52
TfamP40630 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TfamP40630 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TfamP40630 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TfamP40630 Gm13226-201ENSMUST00000117838 404 ntBASIC11.79□□□□□ -0.52
TfamP40630 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.79□□□□□ -0.52
TfamP40630 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TfamP40630 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.79□□□□□ -0.52
TfamP40630 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms