Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd1P40201 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chd1P40201 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd1P40201 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.85■□□□□ 0.45
Chd1P40201 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd1P40201 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Chd1P40201 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1P40201 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chd1P40201 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC17.84■□□□□ 0.45
Chd1P40201 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1P40201 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Chd1P40201 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Chd1P40201 Gm16209-201ENSMUST00000118457 627 ntBASIC17.84■□□□□ 0.45
Chd1P40201 Gm12684-201ENSMUST00000118675 999 ntBASIC17.84■□□□□ 0.45
Chd1P40201 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC17.84■□□□□ 0.45
Chd1P40201 Gm10171-201ENSMUST00000126220 628 ntBASIC17.84■□□□□ 0.45
Chd1P40201 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC17.84■□□□□ 0.45
Chd1P40201 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1P40201 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC17.84■□□□□ 0.45
Chd1P40201 Gm37284-201ENSMUST00000193607 539 ntBASIC17.84■□□□□ 0.45
Chd1P40201 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC17.84■□□□□ 0.45
Chd1P40201 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1P40201 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1P40201 Gm10233-201ENSMUST00000089275 628 ntBASIC17.84■□□□□ 0.45
Chd1P40201 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Chd1P40201 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.84■□□□□ 0.45
Chd1P40201 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Chd1P40201 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1P40201 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Chd1P40201 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Chd1P40201 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Chd1P40201 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1P40201 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1P40201 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1P40201 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1P40201 Gm1840-201ENSMUST00000051687 1432 ntBASIC17.84■□□□□ 0.45
Chd1P40201 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1P40201 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC17.84■□□□□ 0.45
Chd1P40201 Gm43244-201ENSMUST00000196994 1285 ntBASIC17.84■□□□□ 0.45
Chd1P40201 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC17.84■□□□□ 0.45
Chd1P40201 Gm5178-201ENSMUST00000219380 898 ntBASIC17.84■□□□□ 0.45
Chd1P40201 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1P40201 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd1P40201 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd1P40201 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Chd1P40201 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd1P40201 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
Chd1P40201 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Chd1P40201 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Chd1P40201 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd1P40201 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC17.83■□□□□ 0.45
Chd1P40201 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd1P40201 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chd1P40201 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Chd1P40201 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Chd1P40201 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Chd1P40201 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Gm11960-201ENSMUST00000122068 925 ntBASIC17.83■□□□□ 0.44
Chd1P40201 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd1P40201 Gm23647-201ENSMUST00000175042 109 ntBASIC17.83■□□□□ 0.44
Chd1P40201 Rn5s-201ENSMUST00000177555 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s108-201ENSMUST00000177575 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s121-201ENSMUST00000177589 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s146-201ENSMUST00000177889 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 Gm22109-201ENSMUST00000177995 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 Gm22291-201ENSMUST00000178027 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s141-201ENSMUST00000178066 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 Gm23284-201ENSMUST00000178069 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s100-201ENSMUST00000178106 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s111-201ENSMUST00000178203 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s105-201ENSMUST00000178499 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s149-201ENSMUST00000178520 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s103-201ENSMUST00000178755 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s123-201ENSMUST00000178804 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s142-201ENSMUST00000178820 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s144-201ENSMUST00000178859 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s139-201ENSMUST00000178975 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s134-201ENSMUST00000178983 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s136-201ENSMUST00000179080 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 Gm25018-201ENSMUST00000179081 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s104-201ENSMUST00000179107 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s113-201ENSMUST00000179143 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s133-201ENSMUST00000179275 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s117-201ENSMUST00000179431 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 Gm25212-201ENSMUST00000179432 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s138-201ENSMUST00000179476 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s122-201ENSMUST00000179500 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s143-201ENSMUST00000179542 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s107-201ENSMUST00000179704 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 Gm26391-201ENSMUST00000179843 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s110-201ENSMUST00000179995 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s128-201ENSMUST00000180096 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 n-R5s124-201ENSMUST00000180334 119 ntBASIC17.83■□□□□ 0.44
Chd1P40201 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC17.83■□□□□ 0.44
Chd1P40201 Gm42751-201ENSMUST00000198065 559 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms