Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Upk2P38575 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Upk2P38575 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk2P38575 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Upk2P38575 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk2P38575 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk2P38575 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.69□□□□□ -0.7
Upk2P38575 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk2P38575 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk2P38575 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk2P38575 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk2P38575 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Upk2P38575 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Upk2P38575 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Upk2P38575 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.69□□□□□ -0.7
Upk2P38575 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.68□□□□□ -0.7
Upk2P38575 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.68□□□□□ -0.7
Upk2P38575 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.68□□□□□ -0.7
Upk2P38575 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.68□□□□□ -0.7
Upk2P38575 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Upk2P38575 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.68□□□□□ -0.7
Upk2P38575 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Upk2P38575 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Upk2P38575 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Upk2P38575 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Upk2P38575 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Upk2P38575 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Upk2P38575 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Upk2P38575 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Upk2P38575 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.68□□□□□ -0.7
Upk2P38575 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.68□□□□□ -0.7
Upk2P38575 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.68□□□□□ -0.7
Upk2P38575 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.68□□□□□ -0.7
Upk2P38575 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.68□□□□□ -0.7
Upk2P38575 Gm9368-201ENSMUST00000219348 831 ntBASIC10.68□□□□□ -0.7
Upk2P38575 Gm8712-201ENSMUST00000221090 701 ntBASIC10.68□□□□□ -0.7
Upk2P38575 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.68□□□□□ -0.7
Upk2P38575 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.68□□□□□ -0.7
Upk2P38575 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Upk2P38575 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Upk2P38575 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Upk2P38575 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.67□□□□□ -0.7
Upk2P38575 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Upk2P38575 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Upk2P38575 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Upk2P38575 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.67□□□□□ -0.7
Upk2P38575 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Gm15547-201ENSMUST00000122152 333 ntBASIC10.67□□□□□ -0.7
Upk2P38575 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.67□□□□□ -0.7
Upk2P38575 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Gm6621-201ENSMUST00000193251 772 ntBASIC10.67□□□□□ -0.7
Upk2P38575 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.67□□□□□ -0.7
Upk2P38575 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.67□□□□□ -0.7
Upk2P38575 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.67□□□□□ -0.7
Upk2P38575 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.67□□□□□ -0.7
Upk2P38575 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.67□□□□□ -0.7
Upk2P38575 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Gm10312-201ENSMUST00000078515 489 ntBASIC10.67□□□□□ -0.7
Upk2P38575 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk2P38575 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.67□□□□□ -0.7
Upk2P38575 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms