Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Rom1P32958 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Rom1P32958 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Rom1P32958 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Rom1P32958 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Rom1P32958 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Rom1P32958 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Rom1P32958 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.62□□□□□ -0.87
Rom1P32958 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC9.62□□□□□ -0.87
Rom1P32958 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.62□□□□□ -0.87
Rom1P32958 Gm23119-201ENSMUST00000158610 140 ntBASIC9.62□□□□□ -0.87
Rom1P32958 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Gm6736-201ENSMUST00000166583 948 ntBASIC9.62□□□□□ -0.87
Rom1P32958 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC9.62□□□□□ -0.87
Rom1P32958 Gm43514-201ENSMUST00000198852 424 ntBASIC9.62□□□□□ -0.87
Rom1P32958 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.62□□□□□ -0.87
Rom1P32958 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC9.62□□□□□ -0.87
Rom1P32958 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Rom1P32958 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Rom1P32958 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC9.62□□□□□ -0.87
Rom1P32958 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
Rom1P32958 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Rom1P32958 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.62□□□□□ -0.87
Rom1P32958 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.62□□□□□ -0.87
Rom1P32958 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Rom1P32958 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.62□□□□□ -0.87
Rom1P32958 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rom1P32958 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Rom1P32958 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.61□□□□□ -0.87
Rom1P32958 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.61□□□□□ -0.87
Rom1P32958 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.61□□□□□ -0.87
Rom1P32958 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.61□□□□□ -0.87
Rom1P32958 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rom1P32958 Snord83b-201ENSMUST00000104546 94 ntBASIC9.61□□□□□ -0.87
Rom1P32958 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC9.61□□□□□ -0.87
Rom1P32958 Gm8213-201ENSMUST00000118191 441 ntBASIC9.61□□□□□ -0.87
Rom1P32958 Gm13616-201ENSMUST00000120600 222 ntBASIC9.61□□□□□ -0.87
Rom1P32958 Gm15321-201ENSMUST00000121290 288 ntBASIC9.61□□□□□ -0.87
Rom1P32958 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC9.61□□□□□ -0.87
Rom1P32958 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC9.61□□□□□ -0.87
Rom1P32958 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms