Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.32□□□□□ -0.6
Hoxc5P32043 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.32□□□□□ -0.6
Hoxc5P32043 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxc5P32043 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Gm39404-201ENSMUST00000216350 313 ntBASIC11.32□□□□□ -0.6
Hoxc5P32043 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hoxc5P32043 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxc5P32043 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.32□□□□□ -0.6
Hoxc5P32043 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hoxc5P32043 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.32□□□□□ -0.6
Hoxc5P32043 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hoxc5P32043 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc5P32043 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.31□□□□□ -0.6
Hoxc5P32043 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Gm16379-201ENSMUST00000161469 348 ntBASIC11.31□□□□□ -0.6
Hoxc5P32043 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.31□□□□□ -0.6
Hoxc5P32043 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Gm8762-201ENSMUST00000193486 339 ntBASIC11.31□□□□□ -0.6
Hoxc5P32043 Gm37008-201ENSMUST00000195712 319 ntBASIC11.31□□□□□ -0.6
Hoxc5P32043 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Gm5781-201ENSMUST00000219792 443 ntBASIC11.31□□□□□ -0.6
Hoxc5P32043 Gm8227-201ENSMUST00000223306 571 ntBASIC11.31□□□□□ -0.6
Hoxc5P32043 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc5P32043 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxc5P32043 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc5P32043 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.3□□□□□ -0.6
Hoxc5P32043 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.3□□□□□ -0.6
Hoxc5P32043 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc5P32043 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms