Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.97□□□□□ -0.17
Vcam1P29533 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vcam1P29533 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vcam1P29533 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
Vcam1P29533 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Vcam1P29533 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.96□□□□□ -0.17
Vcam1P29533 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Vcam1P29533 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.96□□□□□ -0.17
Vcam1P29533 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Gm13916-201ENSMUST00000117368 628 ntBASIC13.96□□□□□ -0.17
Vcam1P29533 Gm14460-201ENSMUST00000121511 639 ntBASIC13.96□□□□□ -0.17
Vcam1P29533 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.96□□□□□ -0.17
Vcam1P29533 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.96□□□□□ -0.17
Vcam1P29533 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Vcam1P29533 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Gm9132-201ENSMUST00000210182 832 ntBASIC13.96□□□□□ -0.17
Vcam1P29533 Gm45398-201ENSMUST00000210561 165 ntBASIC13.96□□□□□ -0.17
Vcam1P29533 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Vcam1P29533 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.96□□□□□ -0.17
Vcam1P29533 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.96□□□□□ -0.17
Vcam1P29533 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vcam1P29533 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Vcam1P29533 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.96□□□□□ -0.17
Vcam1P29533 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vcam1P29533 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.96□□□□□ -0.17
Vcam1P29533 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vcam1P29533 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.96□□□□□ -0.18
Vcam1P29533 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.96□□□□□ -0.18
Vcam1P29533 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vcam1P29533 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vcam1P29533 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vcam1P29533 Map1b-203ENSMUST00000223725 2669 ntBASIC13.96□□□□□ -0.18
Vcam1P29533 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vcam1P29533 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vcam1P29533 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Vcam1P29533 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Vcam1P29533 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.95□□□□□ -0.18
Vcam1P29533 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.95□□□□□ -0.18
Vcam1P29533 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.95□□□□□ -0.18
Vcam1P29533 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.95□□□□□ -0.18
Vcam1P29533 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Gm9463-201ENSMUST00000206707 601 ntBASIC13.95□□□□□ -0.18
Vcam1P29533 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.95□□□□□ -0.18
Vcam1P29533 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.95□□□□□ -0.18
Vcam1P29533 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Vcam1P29533 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.95□□□□□ -0.18
Vcam1P29533 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.95□□□□□ -0.18
Vcam1P29533 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Vcam1P29533 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vcam1P29533 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Vcam1P29533 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcam1P29533 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Vcam1P29533 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Vcam1P29533 Gm22711-201ENSMUST00000116890 133 ntBASIC13.94□□□□□ -0.18
Vcam1P29533 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms