Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.55□□□□□ -0.4
Nfkb1P25799 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.55□□□□□ -0.4
Nfkb1P25799 Gm11331-201ENSMUST00000119764 288 ntBASIC12.55□□□□□ -0.4
Nfkb1P25799 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.55□□□□□ -0.4
Nfkb1P25799 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.55□□□□□ -0.4
Nfkb1P25799 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.55□□□□□ -0.4
Nfkb1P25799 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.55□□□□□ -0.4
Nfkb1P25799 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.55□□□□□ -0.4
Nfkb1P25799 AU022133-201ENSMUST00000200601 873 ntBASIC12.55□□□□□ -0.4
Nfkb1P25799 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.55□□□□□ -0.4
Nfkb1P25799 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.55□□□□□ -0.4
Nfkb1P25799 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.55□□□□□ -0.4
Nfkb1P25799 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nfkb1P25799 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Nfkb1P25799 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.55□□□□□ -0.4
Nfkb1P25799 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.55□□□□□ -0.4
Nfkb1P25799 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Nfkb1P25799 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Nfkb1P25799 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nfkb1P25799 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.54□□□□□ -0.4
Nfkb1P25799 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Gm22133-201ENSMUST00000102082 109 ntBASIC12.54□□□□□ -0.4
Nfkb1P25799 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Nfkb1P25799 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Nfkb1P25799 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nfkb1P25799 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
Nfkb1P25799 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.54□□□□□ -0.4
Nfkb1P25799 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Gm18734-201ENSMUST00000172937 808 ntBASIC12.54□□□□□ -0.4
Nfkb1P25799 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.54□□□□□ -0.4
Nfkb1P25799 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Nfkb1P25799 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.54□□□□□ -0.4
Nfkb1P25799 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.54□□□□□ -0.4
Nfkb1P25799 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nfkb1P25799 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nfkb1P25799 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.54□□□□□ -0.4
Nfkb1P25799 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Nfkb1P25799 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.54□□□□□ -0.4
Nfkb1P25799 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nfkb1P25799 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.53□□□□□ -0.4
Nfkb1P25799 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.53□□□□□ -0.4
Nfkb1P25799 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nfkb1P25799 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.53□□□□□ -0.4
Nfkb1P25799 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.53□□□□□ -0.4
Nfkb1P25799 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.53□□□□□ -0.4
Nfkb1P25799 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms