Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Col8a2P25318 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Col8a2P25318 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.17□□□□□ -0.78
Col8a2P25318 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.17□□□□□ -0.78
Col8a2P25318 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.17□□□□□ -0.78
Col8a2P25318 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Col8a2P25318 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.17□□□□□ -0.78
Col8a2P25318 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.17□□□□□ -0.78
Col8a2P25318 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Gm9230-201ENSMUST00000188228 532 ntBASIC10.17□□□□□ -0.78
Col8a2P25318 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.17□□□□□ -0.78
Col8a2P25318 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.17□□□□□ -0.78
Col8a2P25318 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Col8a2P25318 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Col8a2P25318 Map1b-203ENSMUST00000223725 2669 ntBASIC10.17□□□□□ -0.78
Col8a2P25318 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.17□□□□□ -0.78
Col8a2P25318 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Col8a2P25318 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Col8a2P25318 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Col8a2P25318 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Col8a2P25318 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.16□□□□□ -0.78
Col8a2P25318 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Col8a2P25318 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Col8a2P25318 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Col8a2P25318 Gm7857-201ENSMUST00000117957 358 ntBASIC10.16□□□□□ -0.78
Col8a2P25318 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.16□□□□□ -0.78
Col8a2P25318 Gm23699-201ENSMUST00000158835 135 ntBASIC10.16□□□□□ -0.78
Col8a2P25318 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Col8a2P25318 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.16□□□□□ -0.78
Col8a2P25318 Gm9555-201ENSMUST00000200908 583 ntBASIC10.16□□□□□ -0.78
Col8a2P25318 Gm4607-201ENSMUST00000206649 577 ntBASIC10.16□□□□□ -0.78
Col8a2P25318 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.16□□□□□ -0.78
Col8a2P25318 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.16□□□□□ -0.78
Col8a2P25318 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.16□□□□□ -0.78
Col8a2P25318 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.16□□□□□ -0.78
Col8a2P25318 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.16□□□□□ -0.78
Col8a2P25318 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Col8a2P25318 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Col8a2P25318 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.16□□□□□ -0.78
Col8a2P25318 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Col8a2P25318 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Col8a2P25318 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.15□□□□□ -0.78
Col8a2P25318 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.15□□□□□ -0.78
Col8a2P25318 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms