Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf1aP25118 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf1aP25118 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf1aP25118 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf1aP25118 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf1aP25118 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf1aP25118 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf1aP25118 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Pck2-205ENSMUST00000226352 2784 ntBASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Gm10434-201ENSMUST00000101158 471 ntBASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Gm6023-201ENSMUST00000118217 606 ntBASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Gm13342-201ENSMUST00000121055 207 ntBASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Gm24548-201ENSMUST00000158650 108 ntBASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Tnfrsf1aP25118 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.21□□□□□ -0.78
Tnfrsf1aP25118 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Gm12742-201ENSMUST00000117326 410 ntBASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Gm23119-201ENSMUST00000158610 140 ntBASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Tnfrsf1aP25118 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms