Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rmrp-201ENSMUST00000157463 271 ntBASIC11.73□□□□□ -0.53
BdnfP21237 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.73□□□□□ -0.53
BdnfP21237 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.73□□□□□ -0.53
BdnfP21237 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.73□□□□□ -0.53
BdnfP21237 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.73□□□□□ -0.53
BdnfP21237 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.73□□□□□ -0.53
BdnfP21237 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.73□□□□□ -0.53
BdnfP21237 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
BdnfP21237 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.73□□□□□ -0.53
BdnfP21237 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
BdnfP21237 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
BdnfP21237 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
BdnfP21237 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
BdnfP21237 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
BdnfP21237 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
BdnfP21237 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
BdnfP21237 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
BdnfP21237 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.72□□□□□ -0.53
BdnfP21237 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.72□□□□□ -0.53
BdnfP21237 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Gm1335-201ENSMUST00000121653 386 ntBASIC11.72□□□□□ -0.53
BdnfP21237 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
BdnfP21237 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.72□□□□□ -0.53
BdnfP21237 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
BdnfP21237 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
BdnfP21237 Gm27682-201ENSMUST00000183930 110 ntBASIC11.72□□□□□ -0.53
BdnfP21237 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.72□□□□□ -0.53
BdnfP21237 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.72□□□□□ -0.53
BdnfP21237 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.72□□□□□ -0.53
BdnfP21237 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
BdnfP21237 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
BdnfP21237 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
BdnfP21237 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
BdnfP21237 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BdnfP21237 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
BdnfP21237 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
BdnfP21237 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
BdnfP21237 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.71□□□□□ -0.53
BdnfP21237 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.53
BdnfP21237 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
BdnfP21237 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.71□□□□□ -0.53
BdnfP21237 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
BdnfP21237 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
BdnfP21237 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
BdnfP21237 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.71□□□□□ -0.53
BdnfP21237 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.71□□□□□ -0.53
BdnfP21237 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
BdnfP21237 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
BdnfP21237 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BdnfP21237 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms