Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Gm43980-201ENSMUST00000204899 1612 ntBASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Gm12752-201ENSMUST00000121657 811 ntBASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Mir6927-201ENSMUST00000184494 71 ntBASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Gm44069-201ENSMUST00000204898 506 ntBASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Tnfrsf9P20334 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Gm10764-202ENSMUST00000220397 2335 ntBASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Gm12217-201ENSMUST00000118858 696 ntBASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Gm11222-201ENSMUST00000119005 738 ntBASIC10.21□□□□□ -0.77
Tnfrsf9P20334 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Gm44967-201ENSMUST00000207047 631 ntBASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Gm18212-201ENSMUST00000211678 889 ntBASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Gm19208-201ENSMUST00000213861 912 ntBASIC10.21□□□□□ -0.77
Tnfrsf9P20334 AC153801.1-201ENSMUST00000217904 947 ntBASIC10.21□□□□□ -0.77
Tnfrsf9P20334 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.21□□□□□ -0.77
Tnfrsf9P20334 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms