Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.89□□□□□ -0.83
Cdx1P18111 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cdx1P18111 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cdx1P18111 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cdx1P18111 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Gm14660-201ENSMUST00000119809 575 ntBASIC9.89□□□□□ -0.83
Cdx1P18111 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Cdx1P18111 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC9.89□□□□□ -0.83
Cdx1P18111 Gm38671-201ENSMUST00000200573 130 ntBASIC9.89□□□□□ -0.83
Cdx1P18111 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cdx1P18111 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.89□□□□□ -0.83
Cdx1P18111 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC9.89□□□□□ -0.83
Cdx1P18111 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
Cdx1P18111 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cdx1P18111 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx1P18111 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Cdx1P18111 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Cdx1P18111 Gm43636-201ENSMUST00000201501 2235 ntBASIC9.88□□□□□ -0.83
Cdx1P18111 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Cdx1P18111 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.88□□□□□ -0.83
Cdx1P18111 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Cdx1P18111 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Cdx1P18111 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cdx1P18111 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.88□□□□□ -0.83
Cdx1P18111 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.88□□□□□ -0.83
Cdx1P18111 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cdx1P18111 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cdx1P18111 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.88□□□□□ -0.83
Cdx1P18111 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.88□□□□□ -0.83
Cdx1P18111 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Gm17420-201ENSMUST00000164753 153 ntBASIC9.88□□□□□ -0.83
Cdx1P18111 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Cdx1P18111 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
Cdx1P18111 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Gm27731-201ENSMUST00000185192 107 ntBASIC9.88□□□□□ -0.83
Cdx1P18111 Gm5276-201ENSMUST00000196683 1047 ntBASIC9.88□□□□□ -0.83
Cdx1P18111 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.88□□□□□ -0.83
Cdx1P18111 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC9.88□□□□□ -0.83
Cdx1P18111 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Gm10478-201ENSMUST00000084451 396 ntBASIC9.88□□□□□ -0.83
Cdx1P18111 Gm6091-201ENSMUST00000098307 165 ntBASIC9.88□□□□□ -0.83
Cdx1P18111 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.88□□□□□ -0.83
Cdx1P18111 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.88□□□□□ -0.83
Cdx1P18111 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx1P18111 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC9.88□□□□□ -0.83
Cdx1P18111 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cdx1P18111 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cdx1P18111 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms