Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cxcl1P12850 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.08□□□□□ -0.8
Cxcl1P12850 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Cxcl1P12850 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Cxcl1P12850 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Cxcl1P12850 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.08□□□□□ -0.8
Cxcl1P12850 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
Cxcl1P12850 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Gm26927-201ENSMUST00000182385 965 ntBASIC10.08□□□□□ -0.8
Cxcl1P12850 Gm27892-201ENSMUST00000185017 106 ntBASIC10.08□□□□□ -0.8
Cxcl1P12850 Gm44405-201ENSMUST00000198952 126 ntBASIC10.08□□□□□ -0.8
Cxcl1P12850 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.08□□□□□ -0.8
Cxcl1P12850 Gm9908-201ENSMUST00000211534 448 ntBASIC10.08□□□□□ -0.8
Cxcl1P12850 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.08□□□□□ -0.8
Cxcl1P12850 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.08□□□□□ -0.8
Cxcl1P12850 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cxcl1P12850 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl1P12850 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cxcl1P12850 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cxcl1P12850 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.07□□□□□ -0.8
Cxcl1P12850 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.07□□□□□ -0.8
Cxcl1P12850 Gm12502-201ENSMUST00000120197 444 ntBASIC10.07□□□□□ -0.8
Cxcl1P12850 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.07□□□□□ -0.8
Cxcl1P12850 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cxcl1P12850 Gm5904-201ENSMUST00000210286 865 ntBASIC10.07□□□□□ -0.8
Cxcl1P12850 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Gm10076-201ENSMUST00000073238 384 ntBASIC10.07□□□□□ -0.8
Cxcl1P12850 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.07□□□□□ -0.8
Cxcl1P12850 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.07□□□□□ -0.8
Cxcl1P12850 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Cxcl1P12850 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cxcl1P12850 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.07□□□□□ -0.8
Cxcl1P12850 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.07□□□□□ -0.8
Cxcl1P12850 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cxcl1P12850 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cxcl1P12850 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms