Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P06344 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
P06344 Gm2260-201ENSMUST00000184965 657 ntBASIC10.89□□□□□ -0.67
P06344 Gm32999-201ENSMUST00000192693 562 ntBASIC10.89□□□□□ -0.67
P06344 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.89□□□□□ -0.67
P06344 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P06344 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
P06344 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.89□□□□□ -0.67
P06344 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.89□□□□□ -0.67
P06344 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.88□□□□□ -0.67
P06344 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.88□□□□□ -0.67
P06344 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.88□□□□□ -0.67
P06344 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.88□□□□□ -0.67
P06344 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Gm18212-201ENSMUST00000211678 889 ntBASIC10.88□□□□□ -0.67
P06344 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.88□□□□□ -0.67
P06344 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.88□□□□□ -0.67
P06344 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.88□□□□□ -0.67
P06344 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.88□□□□□ -0.67
P06344 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
P06344 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P06344 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.87□□□□□ -0.67
P06344 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.87□□□□□ -0.67
P06344 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.87□□□□□ -0.67
P06344 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
P06344 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.87□□□□□ -0.67
P06344 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
P06344 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
P06344 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.87□□□□□ -0.67
P06344 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Gm5363-201ENSMUST00000211927 938 ntBASIC10.87□□□□□ -0.67
P06344 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.87□□□□□ -0.67
P06344 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.87□□□□□ -0.67
P06344 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.87□□□□□ -0.67
P06344 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
P06344 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.87□□□□□ -0.67
P06344 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P06344 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms