Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 AA914427-201ENSMUST00000193194 1166 ntBASIC12□□□□□ -0.49
ClppO88696 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12□□□□□ -0.49
ClppO88696 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12□□□□□ -0.49
ClppO88696 Mettl6-204ENSMUST00000227595 1027 ntBASIC12□□□□□ -0.49
ClppO88696 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12□□□□□ -0.49
ClppO88696 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ClppO88696 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ClppO88696 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Gm43984-201ENSMUST00000204572 2864 ntBASIC12□□□□□ -0.49
ClppO88696 Gm45496-201ENSMUST00000209918 2917 ntBASIC12□□□□□ -0.49
ClppO88696 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Gm45828-201ENSMUST00000206938 1836 ntBASIC12□□□□□ -0.49
ClppO88696 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ClppO88696 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
ClppO88696 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.99□□□□□ -0.49
ClppO88696 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.99□□□□□ -0.49
ClppO88696 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
ClppO88696 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.99□□□□□ -0.49
ClppO88696 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.99□□□□□ -0.49
ClppO88696 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.99□□□□□ -0.49
ClppO88696 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.99□□□□□ -0.49
ClppO88696 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Gm16296-201ENSMUST00000159905 325 ntBASIC11.99□□□□□ -0.49
ClppO88696 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.99□□□□□ -0.49
ClppO88696 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.99□□□□□ -0.49
ClppO88696 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.99□□□□□ -0.49
ClppO88696 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ClppO88696 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
ClppO88696 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.99□□□□□ -0.49
ClppO88696 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
ClppO88696 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.99□□□□□ -0.49
ClppO88696 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClppO88696 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
ClppO88696 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
ClppO88696 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
ClppO88696 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.98□□□□□ -0.49
ClppO88696 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.98□□□□□ -0.49
ClppO88696 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.98□□□□□ -0.49
ClppO88696 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.98□□□□□ -0.49
ClppO88696 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms