Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cops4O88544 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.25□□□□□ -0.61
Cops4O88544 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.25□□□□□ -0.61
Cops4O88544 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Cops4O88544 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Gm37922-201ENSMUST00000195596 455 ntBASIC11.25□□□□□ -0.61
Cops4O88544 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.25□□□□□ -0.61
Cops4O88544 Gm8598-201ENSMUST00000221184 836 ntBASIC11.25□□□□□ -0.61
Cops4O88544 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Gm5356-201ENSMUST00000093326 615 ntBASIC11.25□□□□□ -0.61
Cops4O88544 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cops4O88544 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cops4O88544 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.25□□□□□ -0.61
Cops4O88544 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.25□□□□□ -0.61
Cops4O88544 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cops4O88544 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.25□□□□□ -0.61
Cops4O88544 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.25□□□□□ -0.61
Cops4O88544 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cops4O88544 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.24□□□□□ -0.61
Cops4O88544 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cops4O88544 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cops4O88544 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.24□□□□□ -0.61
Cops4O88544 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.24□□□□□ -0.61
Cops4O88544 Gm8213-201ENSMUST00000118191 441 ntBASIC11.24□□□□□ -0.61
Cops4O88544 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.24□□□□□ -0.61
Cops4O88544 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.24□□□□□ -0.61
Cops4O88544 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Proscos-202ENSMUST00000178990 666 ntBASIC11.24□□□□□ -0.61
Cops4O88544 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Gm8099-201ENSMUST00000200510 742 ntBASIC11.24□□□□□ -0.61
Cops4O88544 Gm44882-201ENSMUST00000205702 802 ntBASIC11.24□□□□□ -0.61
Cops4O88544 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.24□□□□□ -0.61
Cops4O88544 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.24□□□□□ -0.61
Cops4O88544 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.24□□□□□ -0.61
Cops4O88544 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.24□□□□□ -0.61
Cops4O88544 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.24□□□□□ -0.61
Cops4O88544 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.24□□□□□ -0.61
Cops4O88544 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Cops4O88544 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Cops4O88544 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cops4O88544 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cops4O88544 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.23□□□□□ -0.61
Cops4O88544 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.23□□□□□ -0.61
Cops4O88544 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Cops4O88544 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Gm8805-201ENSMUST00000117848 313 ntBASIC11.23□□□□□ -0.61
Cops4O88544 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Gm13123-201ENSMUST00000122173 492 ntBASIC11.23□□□□□ -0.61
Cops4O88544 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cops4O88544 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.23□□□□□ -0.61
Cops4O88544 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.23□□□□□ -0.61
Cops4O88544 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms