Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.7□□□□□ -0.38
Ttc3O88196 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ttc3O88196 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ttc3O88196 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ttc3O88196 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.7□□□□□ -0.38
Ttc3O88196 Gm24844-201ENSMUST00000158679 127 ntBASIC12.7□□□□□ -0.38
Ttc3O88196 Gm9192-201ENSMUST00000183221 985 ntBASIC12.7□□□□□ -0.38
Ttc3O88196 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.7□□□□□ -0.38
Ttc3O88196 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.7□□□□□ -0.38
Ttc3O88196 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.7□□□□□ -0.38
Ttc3O88196 Gm45219-201ENSMUST00000205602 465 ntBASIC12.7□□□□□ -0.38
Ttc3O88196 Gm44980-201ENSMUST00000205826 314 ntBASIC12.7□□□□□ -0.38
Ttc3O88196 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.7□□□□□ -0.38
Ttc3O88196 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.7□□□□□ -0.38
Ttc3O88196 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ttc3O88196 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ttc3O88196 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.7□□□□□ -0.38
Ttc3O88196 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ttc3O88196 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ttc3O88196 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.69□□□□□ -0.38
Ttc3O88196 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.69□□□□□ -0.38
Ttc3O88196 Gm4726-201ENSMUST00000135604 736 ntBASIC12.69□□□□□ -0.38
Ttc3O88196 Gm6019-201ENSMUST00000148369 736 ntBASIC12.69□□□□□ -0.38
Ttc3O88196 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ttc3O88196 Mir8115-201ENSMUST00000184992 119 ntBASIC12.69□□□□□ -0.38
Ttc3O88196 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ttc3O88196 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ttc3O88196 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Gm11663-201ENSMUST00000117888 290 ntBASIC12.69□□□□□ -0.38
Ttc3O88196 Gm14460-201ENSMUST00000121511 639 ntBASIC12.69□□□□□ -0.38
Ttc3O88196 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ttc3O88196 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.69□□□□□ -0.38
Ttc3O88196 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.69□□□□□ -0.38
Ttc3O88196 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ttc3O88196 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Ttc3O88196 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ttc3O88196 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ttc3O88196 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ttc3O88196 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ttc3O88196 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ttc3O88196 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ttc3O88196 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ttc3O88196 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Ttc3O88196 Gm14193-201ENSMUST00000105067 153 ntBASIC12.68□□□□□ -0.38
Ttc3O88196 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ttc3O88196 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Ttc3O88196 Gm37458-201ENSMUST00000194055 410 ntBASIC12.68□□□□□ -0.38
Ttc3O88196 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.68□□□□□ -0.38
Ttc3O88196 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.68□□□□□ -0.38
Ttc3O88196 Gm10752-201ENSMUST00000218348 729 ntBASIC12.68□□□□□ -0.38
Ttc3O88196 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.68□□□□□ -0.38
Ttc3O88196 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ttc3O88196 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ttc3O88196 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ttc3O88196 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ttc3O88196 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ttc3O88196 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ttc3O88196 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.68□□□□□ -0.38
Ttc3O88196 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ttc3O88196 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ttc3O88196 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Ttc3O88196 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ttc3O88196 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ttc3O88196 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ttc3O88196 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms