Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC9.4□□□□□ -0.9
MsmbO08540 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
MsmbO08540 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
MsmbO08540 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
MsmbO08540 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
MsmbO08540 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
MsmbO08540 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
MsmbO08540 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
MsmbO08540 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
MsmbO08540 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
MsmbO08540 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
MsmbO08540 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
MsmbO08540 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Gm17435-202ENSMUST00000212699 1998 ntBASIC9.39□□□□□ -0.91
MsmbO08540 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.39□□□□□ -0.91
MsmbO08540 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
MsmbO08540 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
MsmbO08540 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Gm24934-201ENSMUST00000103764 111 ntBASIC9.39□□□□□ -0.91
MsmbO08540 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
MsmbO08540 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
MsmbO08540 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.39□□□□□ -0.91
MsmbO08540 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.39□□□□□ -0.91
MsmbO08540 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
MsmbO08540 Gm2383-201ENSMUST00000181461 807 ntBASIC9.39□□□□□ -0.91
MsmbO08540 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.39□□□□□ -0.91
MsmbO08540 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.39□□□□□ -0.91
MsmbO08540 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC9.39□□□□□ -0.91
MsmbO08540 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.39□□□□□ -0.91
MsmbO08540 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.39□□□□□ -0.91
MsmbO08540 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
MsmbO08540 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
MsmbO08540 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.39□□□□□ -0.91
MsmbO08540 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
MsmbO08540 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.39□□□□□ -0.91
MsmbO08540 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.39□□□□□ -0.91
MsmbO08540 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MsmbO08540 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.38□□□□□ -0.91
MsmbO08540 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
MsmbO08540 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.38□□□□□ -0.91
MsmbO08540 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
MsmbO08540 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.38□□□□□ -0.91
MsmbO08540 Gm6963-201ENSMUST00000147879 379 ntBASIC9.38□□□□□ -0.91
MsmbO08540 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.38□□□□□ -0.91
MsmbO08540 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.38□□□□□ -0.91
MsmbO08540 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MsmbO08540 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.38□□□□□ -0.91
MsmbO08540 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.38□□□□□ -0.91
MsmbO08540 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.38□□□□□ -0.91
MsmbO08540 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.38□□□□□ -0.91
MsmbO08540 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.38□□□□□ -0.91
MsmbO08540 Gm13097-201ENSMUST00000210722 397 ntBASIC9.38□□□□□ -0.91
MsmbO08540 Gm5363-201ENSMUST00000211927 938 ntBASIC9.38□□□□□ -0.91
MsmbO08540 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.38□□□□□ -0.91
MsmbO08540 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC9.38□□□□□ -0.91
MsmbO08540 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms