Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Gm19015-201ENSMUST00000184002 1189 ntBASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Gm37019-201ENSMUST00000192133 2134 ntBASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 AC099645.1-201ENSMUST00000226476 1105 ntBASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Gm44831-201ENSMUST00000208469 2989 ntBASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Gm8899-201ENSMUST00000214635 1332 ntBASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Gm12030-201ENSMUST00000121917 223 ntBASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Gm23153-201ENSMUST00000175323 313 ntBASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcf11G3X9Z4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Gm13668-201ENSMUST00000119237 1001 ntBASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Gm19692-201ENSMUST00000203856 2084 ntBASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcf11G3X9Z4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcf11G3X9Z4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Pcf11G3X9Z4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcf11G3X9Z4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcf11G3X9Z4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pcf11G3X9Z4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Gm25766-201ENSMUST00000104101 131 ntBASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Gm9358-201ENSMUST00000183067 927 ntBASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 AC166341.2-201ENSMUST00000220571 120 ntBASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 CT009546.1-201ENSMUST00000222573 1120 ntBASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcf11G3X9Z4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Gm14942-201ENSMUST00000119642 336 ntBASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Gm8531-201ENSMUST00000188319 893 ntBASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcf11G3X9Z4 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms