Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.46□□□□□ -0.57
Colca2F8VPY8 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Gm24791-201ENSMUST00000104284 131 ntBASIC11.46□□□□□ -0.57
Colca2F8VPY8 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Gm8723-201ENSMUST00000166076 820 ntBASIC11.46□□□□□ -0.57
Colca2F8VPY8 Gm8701-201ENSMUST00000169259 874 ntBASIC11.46□□□□□ -0.57
Colca2F8VPY8 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Gm42816-201ENSMUST00000198433 325 ntBASIC11.46□□□□□ -0.57
Colca2F8VPY8 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Mt1-202ENSMUST00000211807 1085 ntBASIC11.46□□□□□ -0.57
Colca2F8VPY8 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.46□□□□□ -0.57
Colca2F8VPY8 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.46□□□□□ -0.57
Colca2F8VPY8 Gm16380-201ENSMUST00000077997 478 ntBASIC11.46□□□□□ -0.57
Colca2F8VPY8 Gm23105-201ENSMUST00000083719 134 ntBASIC11.46□□□□□ -0.57
Colca2F8VPY8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Colca2F8VPY8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Colca2F8VPY8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.46□□□□□ -0.58
Colca2F8VPY8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Colca2F8VPY8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Colca2F8VPY8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Colca2F8VPY8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Colca2F8VPY8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Colca2F8VPY8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Colca2F8VPY8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Colca2F8VPY8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Colca2F8VPY8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Colca2F8VPY8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Colca2F8VPY8 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.45□□□□□ -0.58
Colca2F8VPY8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Gm14274-201ENSMUST00000117182 615 ntBASIC11.45□□□□□ -0.58
Colca2F8VPY8 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Gm9630-201ENSMUST00000178304 885 ntBASIC11.45□□□□□ -0.58
Colca2F8VPY8 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.45□□□□□ -0.58
Colca2F8VPY8 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.45□□□□□ -0.58
Colca2F8VPY8 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.45□□□□□ -0.58
Colca2F8VPY8 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.45□□□□□ -0.58
Colca2F8VPY8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Colca2F8VPY8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.44□□□□□ -0.58
Colca2F8VPY8 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.44□□□□□ -0.58
Colca2F8VPY8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Colca2F8VPY8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Colca2F8VPY8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms