Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm12274-201ENSMUST00000120062 385 ntBASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm15815-201ENSMUST00000120569 255 ntBASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm9089-201ENSMUST00000122027 526 ntBASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Mir8093-201ENSMUST00000185043 137 ntBASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm38117-201ENSMUST00000194653 939 ntBASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm2474-201ENSMUST00000195162 559 ntBASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm43163-201ENSMUST00000196571 442 ntBASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Gm43866-201ENSMUST00000203894 839 ntBASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ccdc188F6WEU2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm13192-201ENSMUST00000101199 208 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm23769-201ENSMUST00000104441 121 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm15615-201ENSMUST00000118876 198 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm10443-201ENSMUST00000119024 210 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm5419-201ENSMUST00000119301 527 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm20694-201ENSMUST00000176943 404 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm26957-201ENSMUST00000182645 977 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm20568-201ENSMUST00000197129 208 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 BC080696-201ENSMUST00000202858 1218 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.24□□□□□ -0.45
Ccdc188F6WEU2 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms