Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Gm6013-201ENSMUST00000212264 699 ntBASIC12.54□□□□□ -0.4
Atf6F6VAN0 Gm5950-201ENSMUST00000213337 772 ntBASIC12.54□□□□□ -0.4
Atf6F6VAN0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atf6F6VAN0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atf6F6VAN0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atf6F6VAN0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Gm14832-201ENSMUST00000121289 322 ntBASIC12.53□□□□□ -0.4
Atf6F6VAN0 Gm24845-201ENSMUST00000158034 109 ntBASIC12.53□□□□□ -0.4
Atf6F6VAN0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC12.53□□□□□ -0.4
Atf6F6VAN0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6F6VAN0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.52□□□□□ -0.4
Atf6F6VAN0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6F6VAN0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6F6VAN0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6F6VAN0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.52□□□□□ -0.4
Atf6F6VAN0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6F6VAN0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6F6VAN0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6F6VAN0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.52□□□□□ -0.4
Atf6F6VAN0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6F6VAN0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Gm18935-201ENSMUST00000212692 664 ntBASIC12.52□□□□□ -0.41
Atf6F6VAN0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.52□□□□□ -0.41
Atf6F6VAN0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.52□□□□□ -0.41
Atf6F6VAN0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6F6VAN0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms