Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm18030-201ENSMUST00000222163 731 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm8873-201ENSMUST00000217847 1439 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm14633-201ENSMUST00000121152 470 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm8618-201ENSMUST00000097570 432 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm6881-201ENSMUST00000121811 833 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm21631-201ENSMUST00000195041 754 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm3945-201ENSMUST00000196637 683 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Klf10-203ENSMUST00000227920 2144 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Gm37009-201ENSMUST00000193297 361 ntBASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Gm6478-201ENSMUST00000099450 742 ntBASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a3E9PWQ3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Gm24231-201ENSMUST00000104315 133 ntBASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Gm14699-201ENSMUST00000122340 228 ntBASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Tspy-ps-203ENSMUST00000186546 989 ntBASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Gm38117-201ENSMUST00000194653 939 ntBASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms