Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brpf3B2KF05 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Brpf3B2KF05 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Gm7029-201ENSMUST00000173226 450 ntBASIC13.52□□□□□ -0.25
Brpf3B2KF05 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Gm45668-201ENSMUST00000211271 493 ntBASIC13.52□□□□□ -0.25
Brpf3B2KF05 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Brpf3B2KF05 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.52□□□□□ -0.25
Brpf3B2KF05 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brpf3B2KF05 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.51□□□□□ -0.25
Brpf3B2KF05 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Gm27701-201ENSMUST00000184498 110 ntBASIC13.51□□□□□ -0.25
Brpf3B2KF05 Gm28911-201ENSMUST00000188837 117 ntBASIC13.51□□□□□ -0.25
Brpf3B2KF05 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.51□□□□□ -0.25
Brpf3B2KF05 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.51□□□□□ -0.25
Brpf3B2KF05 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.51□□□□□ -0.25
Brpf3B2KF05 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Brpf3B2KF05 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.5□□□□□ -0.25
Brpf3B2KF05 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Gm12036-201ENSMUST00000120008 530 ntBASIC13.5□□□□□ -0.25
Brpf3B2KF05 Gm14057-201ENSMUST00000120631 482 ntBASIC13.5□□□□□ -0.25
Brpf3B2KF05 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Gm8018-201ENSMUST00000173536 789 ntBASIC13.5□□□□□ -0.25
Brpf3B2KF05 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Gm6007-201ENSMUST00000208170 823 ntBASIC13.5□□□□□ -0.25
Brpf3B2KF05 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.5□□□□□ -0.25
Brpf3B2KF05 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Gm2423-201ENSMUST00000074863 733 ntBASIC13.5□□□□□ -0.25
Brpf3B2KF05 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brpf3B2KF05 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms