Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1aA2APX8 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.71□□□□□ -0.38
Scn1aA2APX8 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1aA2APX8 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.71□□□□□ -0.38
Scn1aA2APX8 Mir6979-201ENSMUST00000183927 56 ntBASIC12.71□□□□□ -0.38
Scn1aA2APX8 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.71□□□□□ -0.38
Scn1aA2APX8 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1aA2APX8 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scn1aA2APX8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.7□□□□□ -0.38
Scn1aA2APX8 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.7□□□□□ -0.38
Scn1aA2APX8 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Gm23596-201ENSMUST00000104304 132 ntBASIC12.7□□□□□ -0.38
Scn1aA2APX8 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Mir7677-201ENSMUST00000184226 67 ntBASIC12.7□□□□□ -0.38
Scn1aA2APX8 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Gm43947-201ENSMUST00000203019 959 ntBASIC12.7□□□□□ -0.38
Scn1aA2APX8 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.7□□□□□ -0.38
Scn1aA2APX8 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scn1aA2APX8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm12579-201ENSMUST00000118040 783 ntBASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Mir5132-201ENSMUST00000175166 71 ntBASIC12.69□□□□□ -0.38
Scn1aA2APX8 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm43184-201ENSMUST00000197247 542 ntBASIC12.69□□□□□ -0.38
Scn1aA2APX8 Ntng1-201ENSMUST00000051253 327 ntBASIC12.69□□□□□ -0.38
Scn1aA2APX8 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm26448-201ENSMUST00000082446 203 ntBASIC12.69□□□□□ -0.38
Scn1aA2APX8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm15595-201ENSMUST00000120840 961 ntBASIC12.69□□□□□ -0.38
Scn1aA2APX8 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm18753-201ENSMUST00000201000 566 ntBASIC12.69□□□□□ -0.38
Scn1aA2APX8 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Gm10288-201ENSMUST00000084614 537 ntBASIC12.69□□□□□ -0.38
Scn1aA2APX8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn1aA2APX8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn1aA2APX8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms