Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Gm9022-201ENSMUST00000182482 992 ntBASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Gm44405-201ENSMUST00000198952 126 ntBASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm3550W4VSN7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Gm13315-201ENSMUST00000120376 991 ntBASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Gm24548-201ENSMUST00000158650 108 ntBASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Gm27243-201ENSMUST00000183964 521 ntBASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.37□□□□□ -0.75
Gm3550W4VSN7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.37□□□□□ -0.75
Gm3550W4VSN7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm3550W4VSN7 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Gm11425-201ENSMUST00000119608 498 ntBASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm3550W4VSN7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms