Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Rmrp-201ENSMUST00000157463 271 ntBASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Gm37042-201ENSMUST00000193816 581 ntBASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Crlf3Q9Z2L7 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Gm13612-201ENSMUST00000119276 390 ntBASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Gm44882-201ENSMUST00000205702 802 ntBASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Gm6091-201ENSMUST00000098307 165 ntBASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crlf3Q9Z2L7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Crlf3Q9Z2L7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
Crlf3Q9Z2L7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Crlf3Q9Z2L7 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Gm11637-201ENSMUST00000120601 592 ntBASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.33□□□□□ -0.44
Crlf3Q9Z2L7 Mir1982-201ENSMUST00000157368 74 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms